GUS Schema >> RAD::SpotElementResult (subclass of RAD::ElementResult )

This view of ElementResultImp is for array data quantified with the Spot software by CSIRO

Light yellow rows indicate columns provided from the superclass.

column nulls? type description
ELEMENT_RESULT_ID no NUMBER(10,0) Edit
SUBCLASS_VIEW no STRING(27) Edit
ELEMENT_ID no RAD::Element (NUMBER(10,0) ) Edit
COMPOSITE_ELEMENT_RESULT_ID RAD::CompositeElementResult (NUMBER(10,0) ) Edit
QUANTIFICATION_ID no RAD::Quantification (NUMBER(8,0) ) Edit
MEDIAN FLOATThe median pixel value within the spot. Edit
MORPH FLOATValue of a morphological opening at the nominal spot centre. Used as a measure of background. Edit
IQR FLOATThe interquartile range of the logged pixel values within the spot. Edit
MEAN FLOATThe average pixel value within the spot. Edit
BG_MEDIAN FLOATThe median pixel value in the background region. Edit
BG_MEAN FLOATThe average pixel value in the background region. Edit
BG_SD FLOATThe interquartile range of the logged pixel values in the background region. Edit
VALLEY FLOATMedian of median image values in four neighbouring valley regions. Valley regions are square regions between spots. Edit
MORPH_ERODE FLOATValue of a morphological erosion at the nominal spot centre. Edit
MORPH_CLOSE_OPEN FLOATValue of a morphological closing followed by a morphological opening at the spot centre. Edit
AREA NUMBER(12,0) The number of pixels in the segmented spot. Edit
PERIMETER NUMBER(12,0) The perimeter of the spot as measured by the number of pixels in the spot which have a neighbouring pixel outside the spot. Each pixel is considered to have 8 neighbours in this process. Edit
CIRCULARITY FLOATA measure of circularity of the spot equal to area times four pi divided by perimeter squared. This is ideally one for circles and more than one for other shapes. Edit
BADSPOT NUMBER(3,0) A flag which is 1 if the spot area is greater than the product of the horizontal and vertical average spot separations, and 0 otherwise. Edit
VISUAL_FLAG NUMBER(3,0) Visual flag (1 if the spot was flagged, 0 otherwise). Edit

Child tables:

Subclasses: