GUS Schema Browser

	Table	Superclass
Sequence and Features
NA Sequence			Return to Super Category
	DoTS::Assembly	DoTS::NASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Assembly Documentation: The Assembly view of NASequenceImp stores information and consensus sequences generated by assembling EST and mRNA sequences using the cap4 algorithm (Paracel).
	DoTS::DbRefNASequence		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DbRefNASequence Documentation: Links DbRef to NASequence entries
	DoTS::ExternalNASequence	DoTS::NASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ExternalNASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NASequence		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequencePiece		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequencePiece Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SplicedNASequence	DoTS::NASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SplicedNASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::VirtualSequence	DoTS::NASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::VirtualSequence Documentation: No Documentation Provided. Help out: Add Documentation
AA Sequence			Return to Super Category
	DoTS::AASequence		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::DbRefPfamEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DbRefPfamEntry Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ExternalAASequence	DoTS::AASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ExternalAASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::MotifAASequence	DoTS::AASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::MotifAASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NRDBEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NRDBEntry Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::PfamEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PfamEntry Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TranslatedAASequence	DoTS::AASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TranslatedAASequence Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TrivialTranslation	DoTS::AASequence	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TrivialTranslation Documentation: No Documentation Provided. Help out: Add Documentation
NA Sequence Features			Return to Super Category
	DoTS::AlleleFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AlleleFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::BindingSiteFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::BindingSiteFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ChromosomeElementFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ChromosomeElementFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::CollectionNAFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::CollectionNAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::DNARegulatory	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DNARegulatory Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::DNAStructure	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DNAStructure Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ExonFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ExonFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GeneFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::HexamerFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::HexamerFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Immunoglobulin	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Immunoglobulin Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::InflectionPointFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InflectionPointFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::IntronFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::IntronFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::LowComplexityNAFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::LowComplexityNAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Miscellaneous	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Miscellaneous Documentation: Miscellaneous GenBank features go here
	DoTS::NAFeature		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeature Documentation: Superclass view from NAFeature views
	DoTS::PolyAFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PolyAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::PromoterFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PromoterFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ProteinFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Repeats	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Repeats Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ReplicationOriginFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ReplicationOriginFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RestrictionFragmentFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RestrictionFragmentFeature Documentation: This view of NAFeatureImp is for restriction enzyme fragment.
	DoTS::RNAFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNARegulatoryFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNARegulatoryFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAStructure	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAStructure Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAType	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SAGETagFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SAGETagFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ScaffoldGapFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ScaffoldGapFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SeqVariation	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SeqVariation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Source	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Source Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SpliceSiteFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SpliceSiteFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::STS	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::STS Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TandemRepeatFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TandemRepeatFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Transcript	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Transcript Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TransposableElement	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TransposableElement Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::UTRFeature	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::UTRFeature Documentation: No Documentation Provided. Help out: Add Documentation
AA Sequence Features			Return to Super Category
	DoTS::AAFeature		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASeqVariation	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASeqVariation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::DomainFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DomainFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::EpitopeFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::EpitopeFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::LowComplexityAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::LowComplexityAAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::MassSpecFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::MassSpecFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::PlasmoAPFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PlasmoAPFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::PostTranslationalModFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PostTranslationalModFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::PredictedAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PredictedAAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RepeatRegionAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RepeatRegionAAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SecondaryStructureAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SecondaryStructureAAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SignalPeptideFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SignalPeptideFeature Documentation: This view of AAFeatureImp stores predicted and annotated signal peptides.
	DoTS::TertiaryStructureAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TertiaryStructureAAFeature Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TranslatedAAFeatSeg		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TranslatedAAFeatSeg Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::TranslatedAAFeature	DoTS::AAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::TranslatedAAFeature Documentation: the table for translated na_sequence
Feature Relations			Return to Super Category
	DoTS::AALocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AALocation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::DbRefNAFeature		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DbRefNAFeature Documentation: Links DbRef to NAFeature entries.
	DoTS::ExonLocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ExonLocation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FeatureName		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FeatureName Documentation: GenBank feature names
	DoTS::GeneFeatureSAGETagLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneFeatureSAGETagLink Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatRelationshipType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatRelationshipType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatureComment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatureComment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatureRelationship		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatureRelationship Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NALocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NALocation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAFeatureExon		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAFeatureExon Documentation: No Documentation Provided. Help out: Add Documentation
GenBank Sequence Record			Return to Super Category
	DoTS::AAComment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAComment Documentation: Comments about protein
	DoTS::AAEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAEntry Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AAGene		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAGene Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AAGeneSynonym		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAGeneSynonym Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceKeyword		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceKeyword Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceOrganelle		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceOrganelle Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceRef		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceRef Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceTaxon		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceTaxon Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::CommentName		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::CommentName Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Keyword		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Keyword Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAComment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAComment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAEntry Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatureNAGene		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatureNAGene Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatureNAProtein		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatureNAProtein Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAFeatureNAPT		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAFeatureNAPT Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAGene		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAGene Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAPrimaryTranscript		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAPrimaryTranscript Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NAProtein		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NAProtein Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NASeqCytoLocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NASeqCytoLocation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NASequenceKeyword		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NASequenceKeyword Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NASequenceOrganelle		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NASequenceOrganelle Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::NASequenceRef		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::NASequenceRef Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Organelle		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Organelle Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SecondaryAccs		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SecondaryAccs Documentation: No Documentation Provided. Help out: Add Documentation
Similarity			Return to Super Category
	DoTS::BLATAlignment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::BLATAlignment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::BLATAlignmentQuality		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::BLATAlignmentQuality Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ConsistentAlignment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ConsistentAlignment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Similarity		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Similarity Documentation: "Table to record Similarities between two identifers in the database (BLAST, FASTA, SIM4 etc)"
	DoTS::SimilaritySpan		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SimilaritySpan Documentation: Table to record the specifics for each span (HSP) in a similarity
Assembly			Return to Super Category
	DoTS::AssemblyAnatomyPercent		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AssemblyAnatomyPercent Documentation: Materialized view that maps Assemblies to the Anatomy ontology based on source library of the contained sequences
	DoTS::AssemblySequence		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AssemblySequence Documentation: Table to hold the specific information about sequences contained in Assemblies
	DoTS::AssemblySequenceSNP		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AssemblySequenceSNP Documentation: table that records the specifics of the putative SNP in this AssemblySequence
	DoTS::AssemblySNP		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AssemblySNP Documentation: Table to record information about SNPs found in Assemblies
	DoTS::GeneTrapAssembly		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneTrapAssembly Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::MergeSplit		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::MergeSplit Documentation: Table to record when entries (primarily Assemblies or RNAs) merge or split due to Assembly updates
Motifs			Return to Super Category
	DoTS::Motif		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Motif Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::MotifRejectionReason		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::MotifRejectionReason Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RejectedMotif		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RejectedMotif Documentation: No Documentation Provided. Help out: Add Documentation
Function
Central Dogma			Return to Super Category
	DoTS::Gene		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Gene Documentation: A central dogma (GENE->RNA->PROTEIN) table containing gene information for the genes in GUS
	DoTS::GeneCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneCategory Documentation: A controlled vocabulary of the gene categories that could be assigned to a gene
	DoTS::GeneChromosomalLocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneChromosomalLocation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GeneInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneInstance Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GeneInstanceCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneInstanceCategory Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GeneSynonym		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneSynonym Documentation: This table stores gene synonym.
	DoTS::Protein		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Protein Documentation: A central dogma (GENE->RNA->PROTEIN) table containing Protein information for GUS proteins
	DoTS::ProteinCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinCategory Documentation: A controlled vocabulary of the protein categories that could be assigned to a protein
	DoTS::ProteinInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinInstance Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ProteinInstanceCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinInstanceCategory Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ProteinProperty		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinProperty Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ProteinPropertyType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinPropertyType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::ProteinProteinCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinProteinCategory Documentation: Linking table for storing Protein_ids and their Protein_category_id assignments
	DoTS::ProteinSynonym		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ProteinSynonym Documentation: A table which contains protein names that have been assigned to a protein if multiple protein names exist for the protein entry
	DoTS::RNA		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNA Documentation: A central dogma (GENE->RNA->PROTEIN) table containing RNA information for the RNAs in GUS
	DoTS::RNAAnatomy		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAAnatomy Documentation: A table to store the assignments of an anatomy term to a RNA
	DoTS::RNAAnatomyLOE		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAAnatomyLOE Documentation: Table to associate the lines of evidence with the RNAAnatomy assignments
	DoTS::RNACategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNACategory Documentation: A controlled vocabulary of the RNA cateogories that could be assigned to a RNA
	DoTS::RNAIConstruct		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAIConstruct Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAInstance Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAInstanceCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAInstanceCategory Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNAIPhenotype		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNAIPhenotype Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNARNACategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNARNACategory Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RNASecondaryStructure	DoTS::NAFeature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RNASecondaryStructure Documentation: No Documentation Provided. Help out: Add Documentation
Paralog and Family			Return to Super Category
	DoTS::AAFamilyExperiment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAFamilyExperiment Documentation: Experiments to compute protein sequence families
	DoTS::AAParalogExperiment	DoTS::AASeqGroupExperiment	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAParalogExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AAParalogGroup	DoTS::AASequenceGroup	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAParalogGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceFamily		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceFamily Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceGroupFamily		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceGroupFamily Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::InParalogExperiment	DoTS::SeqGroupExperiment	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InParalogExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::InParalogGroup	DoTS::SequenceGroup	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InParalogGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OrthologExperiment	DoTS::SeqGroupExperiment	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OrthologExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OrthologGroup	DoTS::SequenceGroup	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OrthologGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OutParalogExperiment	DoTS::SeqGroupExperiment	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OutParalogExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OutParalogGroup	DoTS::SequenceGroup	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OutParalogGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SeqGroupExperiment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SeqGroupExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequenceFamily		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceFamily Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequenceFamilyExperiment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceFamilyExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequenceGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequenceGroupFamily		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceGroupFamily Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::SequenceSequenceGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceSequenceGroup Documentation: No Documentation Provided. Help out: Add Documentation
Sequence Ortholog, Paralog, Family			Return to Super Category
AA Ortholog			Return to Super Category
	DoTS::AAOrthologExperiment	DoTS::AASeqGroupExperiment	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAOrthologExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AAOrthologGroup	DoTS::AASequenceGroup	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAOrthologGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASeqGroupExperiment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASeqGroupExperiment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AASequenceSequenceGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceSequenceGroup Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::BestSimilarityPair		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::BestSimilarityPair Documentation: No Documentation Provided. Help out: Add Documentation
Mapping			Return to Super Category
	DoTS::EndSequencePairMap		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::EndSequencePairMap Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::EPCR		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::EPCR Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FingerprintClone		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FingerprintClone Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FingerprintCloneContig		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FingerprintCloneContig Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FingerprintCloneMarker		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FingerprintCloneMarker Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FingerprintContig		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FingerprintContig Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::FingerprintMap		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::FingerprintMap Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::MicroSatelliteMap		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::MicroSatelliteMap Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OpticalMapAlignment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OpticalMapAlignment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OpticalMapAlignmentSpan		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OpticalMapAlignmentSpan Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::OpticalMapFragment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::OpticalMapFragment Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RHMap		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RHMap Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RHMapMarker		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RHMapMarker Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RHMarker		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RHMarker Documentation: No Documentation Provided. Help out: Add Documentation
Clones			Return to Super Category
	DoTS::AnatomyLibrary		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AnatomyLibrary Documentation: Table containing the anatomy_id from the anatomy controlled vocabulary that has been assigned to a library from dbest using its dbest_library_id
	DoTS::AnatomyLOE		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AnatomyLOE Documentation: A controlled vocabulary describing the experiment type used as a line of evidence in the RNAAnatomy assignment
	DoTS::Clone		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Clone Documentation: Tracks clone information (e.g. IMAGE clone id)
	DoTS::CloneInSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::CloneInSet Documentation: Relates entries in the Clone table to some CloneSet (e.g. the EPConDB clone set 1.0)
	DoTS::CloneSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::CloneSet Documentation: Describes a set of clones (e.g. the EPConDB clone set 1.0)
	DoTS::DevStageLibrary		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::DevStageLibrary Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::EST		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::EST Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Library		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Library Documentation: Stores clone library information
Interaction			Return to Super Category
	DoTS::Complex		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Complex Documentation: Table used to specify a complex. A complex consists of many ComplexComponents
	DoTS::ComplexAnatomy		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ComplexAnatomy Documentation: Many to many table used to relate Complex to Anatomy
	DoTS::ComplexComponent		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ComplexComponent Documentation: A many to many table used to relate any row in the database to a complex. The ComplexComponent then becomes part of the Complex
	DoTS::ComplexType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::ComplexType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::EffectorActionType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::EffectorActionType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Interaction		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Interaction Documentation: Table used to hold interactions
	DoTS::InteractionInteractionLOE		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InteractionInteractionLOE Documentation: Table to associate the line of evidence with the Interaction assignments
	DoTS::InteractionLOE		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InteractionLOE Documentation: A controlled vocabulary describing the experiment type used as a line of evidence in the interaction assignment
	DoTS::InteractionType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::InteractionType Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Pathway		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Pathway Documentation: Table used to hold pathway information. A pathway is defined by its interactions through the use of the PathwayInteraction relation table
	DoTS::PathwayInteraction		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::PathwayInteraction Documentation: Many to Many table used to relate Interactions and Pathways
	DoTS::RowSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RowSet Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::RowSetMember		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RowSetMember Documentation: No Documentation Provided. Help out: Add Documentation
GO Association			Return to Super Category
	DoTS::GOAssociation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GOAssociation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GOAssociationInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GOAssociationInstance Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GOAssociationInstanceLOE		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GOAssociationInstanceLOE Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GOAssocInstEvidCode		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GOAssocInstEvidCode Documentation: No Documentation Provided. Help out: Add Documentation
Variation			Return to Super Category
	DoTS::Allele		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Allele Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AlleleComplementation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AlleleComplementation Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AlleleInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AlleleInstance Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AllelePhenotype		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AllelePhenotype Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::AllelePhenotypeClass		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AllelePhenotypeClass Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Complementation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Complementation Documentation: No Documentation Provided. Help out: Add Documentation
Raw Mass Spectrometry Results			Return to Super Category
Protein Identification (From Mass Spec Analysis)			Return to Super Category
Transcription Regulation
Regulation Framework			Return to Super Category
Regulatory Moieties			Return to Super Category
	TESS::Moiety		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Moiety Documentation: A base class for inheritance.
	TESS::MoietyComplex	TESS::Moiety	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyComplex Documentation: A generic complex class. There can be any number of members in the complex.
	TESS::MoietyHeteroDimer	TESS::Moiety	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyHeteroDimer Documentation: A heterodimer class. It is assumed that there are only two members of the complex and they are different so should be two TESS.MoietyMember rows refering to one of these entries.
	TESS::MoietyInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyInstance Documentation: Moiety objects may be linked to central dogma objects if their identity can be determined.
	TESS::MoietyMember		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyMember Documentation: This table allows TESS.Moiety to be grouped together to form complexes. There is a whole id which should considered to be the complex, and the child moiety is the member moiety (protein). There should be one TESS.MoietyMember row for each member of the complex. A complex can be build up hierarchically or left flat. I guess this might eventually become an Imp table if we start to detail the relationship.
	TESS::MoietyMonomer	TESS::Moiety	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyMonomer Documentation: A monomer class. It is assumed that members of the complex are the same moiety so there need only be on TESS.MoietyMember row refering to one of these entries.
	TESS::MoietyMultimer	TESS::Moiety	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietyMultimer Documentation: A multimer class. It is assumed that members of the complex are the same moiety so there need only be on TESS.MoietyMember row refering to one of these entries.
	TESS::MoietySynonym		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MoietySynonym Documentation: A synonym for a Moiety since many factors are known by multiple names.
Regulatory Activities			Return to Super Category
	TESS::Activity		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Activity Documentation: This is a base class for inheritance.
	TESS::ActivityConditions		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ActivityConditions Documentation: Storing the conditions in the activity takes place. The links in this table are to be interpreted as logical conjunctions, i.e., all are true simultaneously. If an activity takes place under multiple conditions, e.g., in multiple organs, then each organ would have a record in this table.
	TESS::ActivityGeneRegulation	TESS::Activity	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ActivityGeneRegulation Documentation: No Documentation Provided. Help out: Add Documentation
	TESS::ActivityInferenceSource		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ActivityInferenceSource Documentation: This table acts as a link between an activity and the result of a gene expression experiment that has identified a group of coordinately regulated genes.
	TESS::ActivityModel		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ActivityModel Documentation: This table connects a model to an activity. Rows in this table assert that the model describes an arrangement of DNA bases or features that is believed to be at least correlated with the activity taking place at locations in sequence that match the model. For example, a row in this table might link a DNABinding activity to a weight matrix model of a transcription factor binding site. If a match is found to that weight matrix in genomic sequence, then it may be inferred (with some level of reliability) that the transcription factor will bind there. Since TESS.Activity and TESS.Model are views with many subclasses, this table serves to link any kind of model to any kind of activity.
	TESS::ActivityProteinDnaBinding	TESS::Activity	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ActivityProteinDnaBinding Documentation: This view of TESS.ActivityImp stores DNA-protein interactions between a transcription factor and their DNA binding sites. Each transcription factor will have at least one activity and may have more if it recognizes (distinctly) different sites.
Comments			Return to Super Category
	TESS::Note		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Note Documentation: A place to put (typed) free text for later parsing.
Models			Return to Super Category
	TESS::MarkovChainObs		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MarkovChainObs Documentation: This table links TESS::MultinomialObservationSet to TESS::ModelMarkovChain rows.
	TESS::Model		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Model Documentation: This table is a many-to-many link between TESS.Activity and TESS.SbcgGrammar. TRANSFAC will use the same matrix to multiple factors so we are forced to do the same. New models will typically be for a single activity.
	TESS::ModelMarkovChain	TESS::Model	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ModelMarkovChain Documentation: No Documentation Provided. Help out: Add Documentation
	TESS::ModelSbcgGrammar	TESS::Model	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ModelSbcgGrammar Documentation: No Documentation Provided. Help out: Add Documentation
Multinomial Models			Return to Super Category
	TESS::MultinomialLabel		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MultinomialLabel Documentation: This table store instances of multinomial labels in a set, e.g., 'A' in DNA.
	TESS::MultinomialLabelSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MultinomialLabelSet Documentation: This table stores descriptions of sets of labels, e.g., DNA or AA which are used to label multinomial observations. The actual labels are stored in TESS.MultinomialLabel.
	TESS::MultinomialObservation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MultinomialObservation Documentation: An observation for a TESS.MultinomialLabel in the context of a TESS.MultinomialObservationSet.
	TESS::MultinomialObservationSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::MultinomialObservationSet Documentation: This table stores multinomial observations or probabilities.
Families of Similar Models			Return to Super Category
Occam's Razor			Return to Super Category
High Volume Genome Annotation			Return to Super Category
	TESS::ArchipelagoOfInterest		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ArchipelagoOfInterest Documentation: Tracks a collection of regions of a genome that are of interest to a learning, analysis, or annotation project. The archipelago is a collection of islands that have been created from merged regions.
	TESS::IslandOfInterest		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::IslandOfInterest Documentation: An island of regions that are of interest. Regions are merged when they are overlapping or are sufficiently close. An island is the unit of annotation, i.e., any annotation runs against an archipelago can/should process each island separately. Note that islands apply to both strands so there is no strand information.
	TESS::PredictedBindingSite		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::PredictedBindingSite Documentation: Since transcription factor binding sites are next to worthless, we store them in a separate, lighter weight, table than the DoTS::BindingSite and DoTS::NALocation that we would ordinarily use.
	TESS::RegionOfInterest		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::RegionOfInterest Documentation: A region is a span that surrounds a feature of interest. A link to the defining feature is maintained, as well as to the island that is created by merging nearby or overlapping regions. Note that regions apply to both strands.
Training Sets			Return to Super Category
	TESS::Footprint		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Footprint Documentation: This table represents a link between a sequence feature and an activity, i.e., an instance of the footprint of an activity in DNA or RNA sequence.
	TESS::TrainingSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::TrainingSet Documentation: A selected collection of instances for an activity that can be used to train one or more models.
	TESS::TrainingSetMember		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::TrainingSetMember Documentation: An instance in a training set
Experiment
Protocols			Return to Super Category
	PROT::Action	PROT::Parameterizable	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Action Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ActionInstance	PROT::ParameterizableInstance	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ActionInstance Documentation: No Documentation Provided. Help out: Add Documentation
	TESS::FootprintMethodProtocol		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::FootprintMethodProtocol Documentation: How was the footprint-to-model association made?
	PROT::Hardware	PROT::Parameterizable	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Hardware Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::LabelMethod		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::LabelMethod Documentation: This table holds additional information regarding a labeling protocol.
	PROT::Parameter		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Parameter Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ParameterInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ParameterInstance Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::Parameterizable		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Parameterizable Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ParameterizableInstance		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ParameterizableInstance Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ParameterizableLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ParameterizableLink Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::Protocol	PROT::Parameterizable	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Protocol Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ProtocolAction	PROT::ParameterizableLink	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ProtocolAction Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ProtocolHardware	PROT::ParameterizableLink	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ProtocolHardware Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ProtocolInstance	PROT::ParameterizableInstance	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ProtocolInstance Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ProtocolParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ProtocolParam Documentation: Holds information to describe the parameters used in the protocol
	RAD::ProtocolQCParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ProtocolQCParam Documentation: Holds information about quality control parameters for Protocols
	PROT::ProtocolSoftware	PROT::ParameterizableLink	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ProtocolSoftware Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ProtocolStep		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ProtocolStep Documentation: This table is used to link a protocol that consists of an ordered series of component protocols to its components.
	PROT::Software	PROT::Parameterizable	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Software Documentation: No Documentation Provided. Help out: Add Documentation
Data Transformations and Analyses			Return to Super Category
	TESS::Analysis		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::Analysis Documentation: The Analysis records that fact that either a learning or prediction run was made.
	RAD::AnalysisInput		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AnalysisInput Documentation: Each entry in this table represents an input of a specific down-stream gene expression analysis. Each input to an analysis is a logical group.
	RAD::AnalysisParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AnalysisParam Documentation: This table is used to enter values of down-stream analysis protocol parameters for a specific down-stream gene expression analysis using a given protocol. Precisely this table can be used to either over-write the default value of a parameter (as stored in the ProtocolParam table) or to enter a value of a parameter for which a default had not been set.
	RAD::AnalysisQCParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AnalysisQCParam Documentation: This table is used to enter values of down-stream analysis protocol quality control parameters for a specific down-stream gene expression analysis using a given protocol. Precisely this table can be used to either over-write the default value of a parameter (as stored in the ProtocolQCParam table) or to enter a value of a parameter for which a default had not been set.
	RAD::AnalysisResult		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AnalysisResult Documentation: Holds the results of a down-stream gene expression analysis.
	RAD::ArrayStatTwoConditions	RAD::AnalysisResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayStatTwoConditions Documentation: This view of AnalysisResultImp is for the results of analyses done with the ArrayStat software by Imaging Research Inc. to compare two conditions in order to detect differentially expressed genes.
	RAD::AssayAnalysis		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AssayAnalysis Documentation: This table is used to link an analysis to all assays that were involved in it.
	PROT::DataTransformation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::DataTransformation Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::DataTransformationResult	RAD::AnalysisResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::DataTransformationResult Documentation: This view of RAD3::AnalysisResultImp is used to store the results of array data pre-processing (e.g. normalization and other series of up-stream transformations).
	RAD::HQSpecificity	RAD::AnalysisResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::HQSpecificity Documentation: This view of AnalysisResultImp is for the results of analyses done with the H-Q specificity protocol. The output of such an analysis consists of a tree (e.g. based on an anatomical hierarchy) for each (composite) element examined, where the nodes of the tree store the values for the global and local Shannon entropy and weights.
	RAD::LogicalGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::LogicalGroup Documentation: This table holds information about a group of any kind of entities in RAD tables. For example, a set of process invocations which have been used with a clutering algorithm, typically used as the input for the AnalysisInput table.
	RAD::LogicalGroupLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::LogicalGroupLink Documentation: This table is used to link a group member to its group defined in LogicalGroup.
	TESS::ModelResult		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ModelResult Documentation: No Documentation Provided. Help out: Add Documentation
	TESS::PredictionResult		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::PredictionResult Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::SAM	RAD::AnalysisResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SAM Documentation: This view of AnalysisResultImp is for the results of analyses done with SAM (Statistical Analysis of Microarrays). The output of a SAM analysis consists of a list of significant (composite) elements with attached d statistics and q-values.
	RAD::SpliceArrayAnalysisResult	RAD::AnalysisResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SpliceArrayAnalysisResult Documentation: No Documentation Provided. Help out: Add Documentation
Learning Models			Return to Super Category
	TESS::ParameterGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParameterGroup Documentation: A group of parameters and subgroups.
	TESS::ParameterSubgroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParameterSubgroup Documentation: This is a means of combining TESS.ParameterGroup rows to reuse and override certain parameters.
	TESS::ParameterValue		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParameterValue Documentation: A parameter with name, type and value.
	TESS::ParserItem		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParserItem Documentation: ParserItem is the link between Recognitin and DoTS.NaFeature rows. Some of the parse will be mirrored in DoTS using various NAFeature views and NAFeatureRelationship but not all of it. How much gets mirrored is under control of the material stored in the SbcgAnnotationGuide table. The ParserItem* family of table stores the complete parse. These tables form a parse graph with labeled edges.
	TESS::ParserItemEdgeType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParserItemEdgeType Documentation: This is a CV for the different types of relations between recognition elements, i.e., part-of, contained, join, meet.
	TESS::ParserItemLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::ParserItemLink Documentation: This table links ParserItem row together to form the graph. The edges are labeled or typed so there is a link to the type table.
Model-based Regulatory Feature Prediction			Return to Super Category
Bounded Collection Grammars			Return to Super Category
	TESS::SbcgAnnotationFilter		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgAnnotationFilter Documentation: This table contains the information needed to select a path term, either in the context of a path bound or as a RHS term.
	TESS::SbcgAnnotationFilterTerm		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgAnnotationFilterTerm Documentation: This table contains comparisons between annotation attributes and constant values. These are linked to a TESS.SbcgRecogAnnotationFilter to make a complete filter.
	TESS::SbcgAnnotationGuide		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgAnnotationGuide Documentation: This table contains information about creating annotation objects from elements of a grammar upon a successful parse.
	TESS::SbcgComparisonType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgComparisonType Documentation: This table contains comparision operators to used when comparing annotation attribute values to constants.
	TESS::SbcgNonterminal		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgNonterminal Documentation: This table stores all the nonterminals for a grammar.
	TESS::SbcgPathTermRelationType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgPathTermRelationType Documentation: This table contains controlled vocabulary terms for path bounding term relations.
	TESS::SbcgProduction		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgProduction Documentation: This table stores productions in a grammar. The complete source code for the Details of the production are stored in related tables SbcgRhsTerm, SbcgAnnotationGuide, SbcgRecognition, and SbcgNonterminal. A production is defined as a single expansion for a nonterminal. Thus A -> B C | D E; contains two productions.
	TESS::SbcgProductionType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgProductionType Documentation: This table contains a list of controlled vocabulary terms for the different types of productions in a SBCG.
	TESS::SbcgRecogConsensusString	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogConsensusString Documentation: This table stores consensus strings as recognition primitives in a SBCG.
	TESS::SbcgRecogGap	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogGap Documentation: This view represents a gap. The size (range) is set by the count information on the TESS.SbcgRhsTerm.
	TESS::SbcgRecogMultiObs		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogMultiObs Documentation: No Documentation Provided. Help out: Add Documentation
	TESS::SbcgRecognition		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecognition Documentation: Superclass for all SbcgRecognition views.
	TESS::SbcgRecogPathExpression	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogPathExpression Documentation: Rows in this table form the nub of a path expression that can either be used as a bound or as a RHS term.
	TESS::SbcgRecogPosition	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogPosition Documentation: This view represents absolute or relative positions as patterns to match.
	TESS::SbcgRecogString	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogString Documentation: This table stores strings as recognition primitives in a SBCG.
	TESS::SbcgRecogWeightMatrix	TESS::SbcgRecognition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRecogWeightMatrix Documentation: This table stores the fixed-size information about positional weight matrice as recognition primitives in a SBCG. For the details, look in the set of TESS::Multinomial* tables.
	TESS::SbcgRhsTerm		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgRhsTerm Documentation: This table contains righthand side terms for a production. The actual recognition is kept in a view on RecognitionImp.
	TESS::SbcgStream		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgStream Documentation: This table contains descriptions of the alternate streams and their plugin parameters for a grammar.
	TESS::SbcgStreamParameter		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation TESS Documentation: No Documentation Provided. TESS::SbcgStreamParameter Documentation: This table stores stream plug-in initialization parameters. It is just key.typed-value pairs. We just store types right here as strings. This might be expanded to something like the Core::Algorithm mechanism, but noe now.
Platform			Return to Super Category
	RAD::ArrayDesign		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayDesign Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ArrayDesignAnnotation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayDesignAnnotation Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ArrayDesignGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayDesignGroup Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ArrayDesignGroupLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayDesignGroupLink Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::CompositeElement		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::CompositeElement Documentation: Holds information on groups of elements.
	RAD::CompositeElementAnnotation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::CompositeElementAnnotation Documentation: Overflow table to capture unstructured information about the entries in the CompositeElement table/views.
	RAD::Control		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::Control Documentation: Designates elements on an array that represent controls, such as empty spots or spots with genomic DNA.
	RAD::Element		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::Element Documentation: Holds information about the element
	RAD::ElementAnnotation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ElementAnnotation Documentation: Overflow table to capture unstructured information about the elements.
	PROT::Feature		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Feature Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::FeatureInput		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::FeatureInput Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::FeatureSet		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::FeatureSet Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::FSGAnnotation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::FSGAnnotation Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::MALDIPlate	PROT::FeatureSet	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MALDIPlate Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::MALDISpot	PROT::Feature	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MALDISpot Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::SAGETag	RAD::CompositeElement	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SAGETag Documentation: view of CompositeElementImp for SAGE tags
	RAD::SAGETagMapping	RAD::Element	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SAGETagMapping Documentation: view of ElementImp for mapping tags to genomic sequence
	RAD::ShortOligo	RAD::Element	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ShortOligo Documentation: View of ElementImp. View gives co-ordinate information for oligos on arrays manufactured using photo lithography.
	RAD::ShortOligoFamily	RAD::CompositeElement	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ShortOligoFamily Documentation: View of CompositeElement. View gives common attributes for groups of oligos that map to the same gene.
	RAD::Spot	RAD::Element	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::Spot Documentation: View of ElementImp. View gives coordinate information for elements on a spotted array.
	RAD::SpotFamily	RAD::CompositeElement	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SpotFamily Documentation: View of CompositeElement. View gives common attributes for groups of elements from same source plate/well.
Assay			Return to Super Category
	PROT::Acquisition		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Acquisition Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::AcquisitionChain		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AcquisitionChain Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::AcquisitionChannel		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AcquisitionChannel Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::AcquisitionParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AcquisitionParam Documentation: Holds the name and value of the parameter for the scanner software and hardware.
	PROT::AcquisitionQuantification		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AcquisitionQuantification Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::Assay		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Assay Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::AssayAnnotation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AssayAnnotation Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::AssayChain		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AssayChain Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::AssayControl		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AssayControl Documentation: Relates the Control elements of an Array to Assay-specific values. For example, a spiked-in control would have a concentration associated with that particular hybridization.
	PROT::AssayInput		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AssayInput Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::AssayParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AssayParam Documentation: This table holds the specific parameter setting in the application of a hybridization protocol for a given assay.
	PROT::AssayParentFile		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AssayParentFile Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::AssayProduct		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::AssayProduct Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::MZRun	PROT::Assay	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MZRun Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::MZScan	PROT::Acquisition	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MZScan Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::ParentFile		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ParentFile Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::Quantification		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::Quantification Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::QuantificationParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::QuantificationParam Documentation: Holds information on the parameter settings for a given quantification, including software and version. The name of each parameter and its value are held in this table.
	RAD::RelatedAcquisition		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::RelatedAcquisition Documentation: Relations between acquisitions are stored here, for example the red and green channels of a two channel microarray. Each acquisition is connected by this table to any it is related to. So for example a 2-channel microarray would require two entries, each channel being the acquisition and associated acquisition in turn. A 3-channel array would require six entries. Etc.
	RAD::RelatedQuantification		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::RelatedQuantification Documentation: Used for multi-channel arrays to retrieve, for a given quantification, the quantification corresponding to the other channel(s) in the competitive hybridization.
Quantified Data			Return to Super Category
	RAD::AffymetrixCEL	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AffymetrixCEL Documentation: View of ElementResultImp to hold array data quantified using software by Affymetrix.
	RAD::AffymetrixMAS4	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AffymetrixMAS4 Documentation: This view of CompositeElementResultImp is for quantification of microarray data using Affymetrix Microarray Suite, Version 4.0.
	RAD::AffymetrixMAS5	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AffymetrixMAS5 Documentation: This view of CompositeElementResultImp is for quantification of microarray data using Affymetrix Microarray Suite, Version 5.0.
	RAD::AgilentElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AgilentElementResult Documentation: This view of ElementResultImp is for array data quantified with the Agilent Feature Extraction software.
	RAD::ArrayVisionElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ArrayVisionElementResult Documentation: This view of ElementResultImp is for array data quantified with the ArrayVision software by Imaging Research Inc.
	RAD::CompositeElementResult		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::CompositeElementResult Documentation: Implementation table. Holds a summary value for the composite element view, i.e. if the composite element is a set of duplicate spots on the array, this might be the average intensity; or if the composite element is a set of affy probes in one probe set this might be the affy summary intensity for that probe set.
	PROT::ElementResult		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::ElementResult Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::GEMToolsElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::GEMToolsElementResult Documentation: This view of ElementResultImp is for array data quantified with the GEMTools software by Incyte Genomics
	RAD::GenePixElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::GenePixElementResult Documentation: Stores results from GenePix *.gpr files.
	RAD::MOIDResult	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::MOIDResult Documentation: Holds results from MOID analysis of data generated on an Affymetrix platform.
	PROT::MZPeak	PROT::Quantification	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MZPeak Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::MZPeakResult	PROT::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::MZPeakResult Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ProbeProfiler	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ProbeProfiler Documentation: This view of CompositeElementResultImp is for quantification of microarray data using Probe Profiler (Version 2.0).
	RAD::QuantArrayElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::QuantArrayElementResult Documentation: This view of ElementResultImp is for array data quantified with the Perkin Elmer QuantArray software.
	RAD::RMAExpress	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::RMAExpress Documentation: This view of CompositeElementResultImp is for (Affymetrix) data quantified (and possibly processed) with RMAExpress. RMA (Robust Multichip Average) consists of three steps: a background adjustment (optional), quantile normalization (optional), and finally summarization.
	RAD::SAGETagResult	RAD::CompositeElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SAGETagResult Documentation: view of CompositeElementResultImp
	RAD::ScanAlyzeElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ScanAlyzeElementResult Documentation: This view of ElementResultImp is for array data quantified with the Scanalyze software.
	RAD::SpotElementResult	RAD::ElementResult	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::SpotElementResult Documentation: This view of ElementResultImp is for array data quantified with the Spot software by CSIRO
Experimental Design			Return to Super Category
	Study::Study		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::Study Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::StudyAssay		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::StudyAssay Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::StudyBioMaterial		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::StudyBioMaterial Documentation: No Documentation Provided. Help out: Add Documentation
	Study::StudyDesign		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::StudyDesign Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::StudyDesignAssay		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::StudyDesignAssay Documentation: No Documentation Provided. Help out: Add Documentation
	Study::StudyDesignDescription		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::StudyDesignDescription Documentation: No Documentation Provided. Help out: Add Documentation
	Study::StudyDesignType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::StudyDesignType Documentation: No Documentation Provided. Help out: Add Documentation
	Study::StudyFactor		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::StudyFactor Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::StudyFactorValue		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::StudyFactorValue Documentation: No Documentation Provided. Help out: Add Documentation
Biomaterials			Return to Super Category
	RAD::AssayBioMaterial		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AssayBioMaterial Documentation: linking table between biomaterial and assays
	RAD::AssayLabeledExtract		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::AssayLabeledExtract Documentation: linking table between Assay and LabelledExtract
	Study::BioMaterialCharacteristic		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::BioMaterialCharacteristic Documentation: No Documentation Provided. Help out: Add Documentation
	PROT::BioMaterialMeasurement		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation PROT Documentation: No Documentation Provided. PROT::BioMaterialMeasurement Documentation: No Documentation Provided. Help out: Add Documentation
	Study::BioSample	Study::BioMaterial	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::BioSample Documentation: No Documentation Provided. Help out: Add Documentation
	Study::BioSource	Study::BioMaterial	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::BioSource Documentation: No Documentation Provided. Help out: Add Documentation
	Study::BMCRelationship		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::BMCRelationship Documentation: No Documentation Provided. Help out: Add Documentation
	Study::LabeledExtract	Study::BioMaterial	View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Study Documentation: No Documentation Provided. Study::LabeledExtract Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::Treatment		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::Treatment Documentation: Holds an ordered set of wet-lab treatments on BioMaterials
	RAD::TreatmentParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::TreatmentParam Documentation: Holds the instance value for a ProtocolParam of a Protocol that the owning Treatment is an instance of
(Mixed) Ontologies			Return to Super Category
Integrity			Return to Super Category
	RAD::IntegrityStatInput		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::IntegrityStatInput Documentation: Each entry in this table describes one of the inputs to a particular integrity statistic run involving a trusted set of values in RAD and a newly added set of corresponding values, to catch possible inconsistencies with the loading of the latter. For example, if the integrity statistic computes the correlation between raw and normalized log2 ratios in a given 2-channel array experiment to check that the normalized values were properly loaded, for each element on the array there are 3 inputs: the raw value of the numerator (trusted input), the raw value of the denominator (trusted input), and the value of the normalized log2 ratio.
	RAD::IntegrityStatistic		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::IntegrityStatistic Documentation: Each entry in this table contains information about the statistic used and the result of a particular integrity statistic run involving a trusted set of values in RAD and a newly added set of corresponding values, to catch possible inconsistencies with the loading of the latter. An example is to compute the correlation between raw and normalized log2 ratios in a given 2-channel array experiment to check that the normalized values were properly loaded.
Provenance
Algorithm			Return to Super Category
	Core::Algorithm		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::Algorithm Documentation: No Documentation Provided. Help out: Add Documentation
	Core::AlgorithmImplementation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::AlgorithmImplementation Documentation: No Documentation Provided. Help out: Add Documentation
	Core::AlgorithmInvocation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::AlgorithmInvocation Documentation: No Documentation Provided. Help out: Add Documentation
	Core::AlgorithmParam		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::AlgorithmParam Documentation: No Documentation Provided. Help out: Add Documentation
	Core::AlgorithmParamKey		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::AlgorithmParamKey Documentation: This table stores descriptions of the parameters for an Core::AlgorithmImplementation.
	Core::AlgorithmParamKeyType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::AlgorithmParamKeyType Documentation: No Documentation Provided. Help out: Add Documentation
External Database			Return to Super Category
	SRes::DbRef		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::DbRef Documentation: External reference entries
	SRes::ExternalDatabase		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ExternalDatabase Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::ExternalDatabaseEntry		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ExternalDatabaseEntry Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::ExternalDatabaseLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ExternalDatabaseLink Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::ExternalDatabaseRelease		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ExternalDatabaseRelease Documentation: No Documentation Provided. Help out: Add Documentation
Bibliographic			Return to Super Category
	SRes::Abstract		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Abstract Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Attribution		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Attribution Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::Author		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Author Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::BibliographicReference		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::BibliographicReference Documentation: Each entry in this table represents a reference to an article, book, or other publication.
	SRes::BibRefAuthor		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::BibRefAuthor Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::BibRefType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::BibRefType Documentation: Each entry in this table represents a type of bibliographic reference, e.g. an abstract, a book, journal article, or techical report, etc.
	SRes::Contact		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Contact Documentation: Holds contact information (e.g. name, email address, phone number).
	SRes::Reference		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Reference Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::SequenceReference		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::SequenceReference Documentation: No Documentation Provided. Help out: Add Documentation
Evidence			Return to Super Category
	DoTS::Comments		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Comments Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::Evidence		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::Evidence Documentation: Many many relation to any two tuples in the database to allow linking an evidence fact to it's target
	SRes::ReviewStatus		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ReviewStatus Documentation: No Documentation Provided. Help out: Add Documentation
Vocabularies
Anatomy Vocabulary			Return to Super Category
	SRes::Anatomy		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Anatomy Documentation: Stores anatomy terms in a hierarchical manner through the use of the parent_id, which refers to a row in the same table that is one level closer to the root of the tree
	SRes::AnatomyLineage		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::AnatomyLineage Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::IsExpressed		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::IsExpressed Documentation: Materialized view of sequences that are expressed in some tissue type.
	SRes::Lineage		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Lineage Documentation: No Documentation Provided. Help out: Add Documentation
Gene Ontology			Return to Super Category
	SRes::GOEvidenceCode		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GOEvidenceCode Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::GORelationship		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GORelationship Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::GORelationshipType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GORelationshipType Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::GOSynonym		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GOSynonym Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::GOTerm		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GOTerm Documentation: No Documentation Provided. Help out: Add Documentation
Enzymes Vocabulary			Return to Super Category
	DoTS::AASequenceEnzymeClass		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AASequenceEnzymeClass Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::ECPathway		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ECPathway Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::ECPathwayEnzymeClass		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::ECPathwayEnzymeClass Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::EnzymeClass		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::EnzymeClass Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::EnzymeClassAttribute		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::EnzymeClassAttribute Documentation: No Documentation Provided. Help out: Add Documentation
Taxon Vocabulary			Return to Super Category
	SRes::Taxon		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Taxon Documentation: Holds information from the NCBI Taxonomy.
	SRes::TaxonName		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::TaxonName Documentation: Holds information about the name of the taxon referred to by the taxon_id.
Developmental Stage Vocabulary			Return to Super Category
	SRes::DevelopmentalStage		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::DevelopmentalStage Documentation: Describes the developmental stage of organisms that have such stages
Disease Vocabulary			Return to Super Category
	SRes::Disease		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Disease Documentation: Describes a disease process
Genetic Code Vocabulary			Return to Super Category
	SRes::GeneticCode		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::GeneticCode Documentation: No Documentation Provided. Help out: Add Documentation
MGED Ontology			Return to Super Category
Mutagens Vocabulary			Return to Super Category
	SRes::Mutagen		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Mutagen Documentation: No Documentation Provided. Help out: Add Documentation
Phenotype Vocabulary			Return to Super Category
	SRes::PATOAttribute		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::PATOAttribute Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::Phenotype		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::Phenotype Documentation: No Documentation Provided. Help out: Add Documentation
	SRes::PhenotypeClass		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::PhenotypeClass Documentation: No Documentation Provided. Help out: Add Documentation
Sequence Ontology			Return to Super Category
	SRes::SequenceOntology		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation SRes Documentation: No Documentation Provided. SRes::SequenceOntology Documentation: No Documentation Provided. Help out: Add Documentation
Repeat Types Vocabulary			Return to Super Category
	DoTS::RepeatType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::RepeatType Documentation: No Documentation Provided. Help out: Add Documentation
Sequence Types Vocabulary			Return to Super Category
	DoTS::SequenceType		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::SequenceType Documentation: No Documentation Provided. Help out: Add Documentation
Administration
Meta Info			Return to Super Category
	Core::DatabaseDocumentation		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::DatabaseDocumentation Documentation: Stores documentation describing the intended use of tables and attributes in the GUS schema
	Core::DatabaseInfo		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::DatabaseInfo Documentation: No Documentation Provided. Help out: Add Documentation
	Core::TableCategory		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::TableCategory Documentation: No Documentation Provided. Help out: Add Documentation
	Core::TableInfo		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::TableInfo Documentation: No Documentation Provided. Help out: Add Documentation
Administration			Return to Super Category
	Core::GroupInfo		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::GroupInfo Documentation: No Documentation Provided. Help out: Add Documentation
	Core::ProjectInfo		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::ProjectInfo Documentation: No Documentation Provided. Help out: Add Documentation
	RAD::ProjectLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation RAD Documentation: No Documentation Provided. RAD::ProjectLink Documentation: No Documentation Provided. Help out: Add Documentation
	Core::UserGroup		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::UserGroup Documentation: No Documentation Provided. Help out: Add Documentation
	Core::UserInfo		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::UserInfo Documentation: No Documentation Provided. Help out: Add Documentation
	Core::UserProject		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation Core Documentation: No Documentation Provided. Core::UserProject Documentation: No Documentation Provided. Help out: Add Documentation
Misc Applications			Return to Super Category
	DoTS::AAMotifGOTermRule		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::AAMotifGOTermRule Documentation: No Documentation Provided. Help out: Add Documentation
	DoTS::GeneFeatureSeqOverlap		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::GeneFeatureSeqOverlap Documentation: No Documentation Provided. Help out: Add Documentation
Text Search			Return to Super Category
	DoTS::IndexWord		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::IndexWord Documentation: Table of words that have been indexed
	DoTS::IndexWordLink		View Table | View Documentation | Edit
Edit Table Documentation | Close Documentation DoTS Documentation: No Documentation Provided. DoTS::IndexWordLink Documentation: Relation between an IndexWord and the tuple that has been indexed